Xiaotao SHEN

Xiaotao SHEN

Nanyang Assistant Professor

Nanyang Technological University Singapore

Principal Investigator ๐Ÿ‘จโ€๐Ÿซ

My overarching research interests are bioinformatics algorithms development for multi-omics data, and their application to precision medicine. Specifically, I am interested in bioinformatics algorithm development, including 1) Comprehensive analysis workflow and deep learning for LC-MS data, 2) Metabolic network analysis, 3) Wearable and multi-omics data integration, and 4) microbiome and metabolome data integration. I also employed the developed bioinformatics algorithms as a unique systems biology approach to study the potential biomarkers and mechanisms of 1) pregnancy and related diseases, 2) aging and related diseases, and 3) cancer.

๐Ÿถ ๐Ÿซ ๐Ÿˆธ ๐Ÿ˜„ ๐Ÿ‘Š โœŠ ๐Ÿ‘จโ€๐Ÿ‘ฉโ€๐Ÿ‘ฆ ๐Ÿผ ๐ŸŒ ๐ŸŽ‰ ๐Ÿ‡จ๐Ÿ‡ณ

Interests
  • ๐Ÿ–ฅ๏ธ Bioinformatics
  • ๐Ÿ“ฑ Wearable
  • ๐Ÿ’ฐ Multi-omics
  • ๐Ÿ‘ด Aging and Aging related diseases
  • ๐Ÿคฐ Pregnancy and Pregnancy related diseases
Education
  • Postdoctoral Research Fellow, 2019/4-2024/4

    Stanford University School of Medicine

  • Ph.D., 2013/9-2018/12

    University of Chinese Academy of Sciences

  • BSc, 2009/9-2013/7

    Inner Mongolia University

๐Ÿ‘ฅ Other Members

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Jingxiang ZHANG

Nanyang Technological University

Research Fellow (2024-)

Research interests
  • ๐Ÿ“ฑ Microbiome
  • ๐Ÿ–ฅ๏ธ Bioinformatics
  • ๐Ÿ’ฐ Multi-omics
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Yifei GE

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • ๐Ÿ–ฅ Biostatistics
  • ๐Ÿ’ฐ Mathematics
  • ๐Ÿ’ป Microbiome
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Chi Fang HSU

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • ๐Ÿ–ฅ Gut Microbiome
  • ๐Ÿ–ฅ Toxicology
  • ๐Ÿ’ป Multi-Omics
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Jiramet KINCHAGAWAT

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • ๐Ÿ’ฐ Multi-omics
  • ๐Ÿ–ฅ Bioinformatics
  • ๐Ÿ’ป Artificial Intelligence
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Yijiang LIU

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • ๐Ÿ–ฅ Bioinformatics
  • ๐Ÿ’ฐ Biostatistics
  • ๐Ÿ’ป Population Health
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Yuting WANG

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • ๐Ÿ–ฅ๏ธ Bioinformatics
  • ๐Ÿ’ฐ Multi-omics
  • ๐Ÿ‘ด Aging and Aging related diseases
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Feifan ZHANG

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • ๐Ÿ–ฅ Bioinformatics
  • ๐Ÿ’ป Artificial Intelligence
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Kajal AGRAWAL

Nanyang Technological University

PhD Candidate (Co-supervised with Prof. Sunny Wong)

Research interests
  • ๐Ÿงซ Oral and Gut Microbiome
  • ๐Ÿฆท Periodontal Disease, Oral systemic disease
  • ๐ŸŒฑ Population Health
  • ๐Ÿ”ฌ Translational Research
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Xiaoyu XU

Nanyang Technological University

PhD Candidate (Co-supervised with Prof. Kun Qian)

Research interests
  • ๐Ÿ–ฅ renal cell carcinoma
  • ๐Ÿ’ฐ Biostatistics
  • ๐Ÿ’ป Multi-Omics
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Ruwen ZHOU

Nanyang Technological University

PhD Candidate (Co-supervised with Prof. Sunny Wong)

Research interests
  • ๐Ÿ–ฅ Biostatistics
  • ๐Ÿ’ฐ Mathematics
  • ๐Ÿ’ป Microbiome
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Shuli ZHANG

Northeastern University

Visiting PhD Student (2026-2027)

Research interests
  • ๐Ÿ’ฐ Multi-omics
  • ๐Ÿซ€ Cardiovascular diseases
  • ๐Ÿ”ฌ Molecular genetics
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Diyan LI

Chengdu University

Visiting Scholar (2025-)

Research interests
  • ๐Ÿ’ฐ Metagenomics
  • ๐ŸŒ Infertility
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Yuanming YANG

The First Affiliated Hospital of Guangzhou University of Chinese Medicine

Visiting Scholar (2025-)

Research interests
  • ๐Ÿ’ฐ scRNA-seq
  • ๐ŸŒ multi-omics
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Zhichen HUA

City University of Hong Kong

Summer Intern (2026)

Research interests
  • โ› Artificial intelligence
  • ๐Ÿ’ฐ Wearable devices
  • ๐Ÿงฌ Bioinformatics
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