Peng GAO | Shen Lab@NTU https://shen-lab.org/author/peng-gao/ Peng GAO Wowchemy (https://wowchemy.com)en-us https://shen-lab.org/author/peng-gao/avatar_hu341f7fb1919ebf9d4454f59bfa2eb30c_68321_270x270_fill_q75_lanczos_center.jpeg Peng GAO https://shen-lab.org/author/peng-gao/ Cross-body site microbial interactions influence the human plasma metabolome https://shen-lab.org/publication/cross-body-site-microbial-interactions-influence-the-human-plasma-metabolome/ Thu, 09 Apr 2026 00:00:00 +0000 https://shen-lab.org/publication/cross-body-site-microbial-interactions-influence-the-human-plasma-metabolome/ TidyMass2 Advancing LC-MS Untargeted Metabolomics Through Metabolite Origin Inference and Metabolic Feature-based Functional Module Analysis https://shen-lab.org/publication/tidymass2-advancing-lc-ms-untargeted-metabolomics-through-metabolite-origin-inference-and-metabolic-feature-based-functional-module-analysis/ Sat, 17 Jan 2026 00:00:00 +0000 https://shen-lab.org/publication/tidymass2-advancing-lc-ms-untargeted-metabolomics-through-metabolite-origin-inference-and-metabolic-feature-based-functional-module-analysis/ MetaNet: a scalable and integrated tool for reproducible omics network analysis https://shen-lab.org/publication/metanet-a-scalable-and-integrated-tool-for-reproducible-omics-network-analysis/ Thu, 01 Jan 2026 00:00:00 +0000 https://shen-lab.org/publication/metanet-a-scalable-and-integrated-tool-for-reproducible-omics-network-analysis/ Leveraging Large Language Models for Redundancy-Aware Pathway Analysis and Deep Biological Interpretation https://shen-lab.org/publication/leveraging-large-language-models-for-redundancy-aware-pathway-analysis-and-deep-biological-interpretation/ Sat, 20 Sep 2025 00:00:00 +0000 https://shen-lab.org/publication/leveraging-large-language-models-for-redundancy-aware-pathway-analysis-and-deep-biological-interpretation/ A multistage, multitask transformer-based framework for multi-disease diagnosis and prediction using personal proteomes https://shen-lab.org/publication/a-multistage-multitask-transformer-based-framework-for-multi-disease-diagnosis-and-prediction-using-personal-proteomes/ Wed, 01 Jan 2025 00:00:00 +0000 https://shen-lab.org/publication/a-multistage-multitask-transformer-based-framework-for-multi-disease-diagnosis-and-prediction-using-personal-proteomes/ Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease https://shen-lab.org/publication/longitudinal-profiling-of-the-microbiome-at-four-body-sites-reveals-core-stability-and-individualized-dynamics-during-health-and-disease/ Tue, 12 Mar 2024 00:00:00 +0000 https://shen-lab.org/publication/longitudinal-profiling-of-the-microbiome-at-four-body-sites-reveals-core-stability-and-individualized-dynamics-during-health-and-disease/ Multiomic analysis reveals cell-type-specific molecular determinants of COVID-19 severity https://shen-lab.org/publication/multiomic-analysis-reveals-cell-type-specific-molecular-determinants-of-covid-19-severity/ Wed, 17 Aug 2022 00:00:00 +0000 https://shen-lab.org/publication/multiomic-analysis-reveals-cell-type-specific-molecular-determinants-of-covid-19-severity/ TidyMass an object-oriented reproducible analysis framework for LC–MS data https://shen-lab.org/publication/tidymass-an-object-oriented-reproducible-analysis-framework-for-lcms-data/ Thu, 28 Jul 2022 00:00:00 +0000 https://shen-lab.org/publication/tidymass-an-object-oriented-reproducible-analysis-framework-for-lcms-data/ Precision environmental health monitoring by longitudinal exposome and multi-omics profiling https://shen-lab.org/publication/precision-environmental-health-monitoring-by-longitudinal-exposome-and-multi-omics-profiling/ Wed, 01 Jun 2022 00:00:00 +0000 https://shen-lab.org/publication/precision-environmental-health-monitoring-by-longitudinal-exposome-and-multi-omics-profiling/ Common and rare variant analyses combined with single-cell multiomics reveal cell-type-specific molecular mechanisms of COVID-19 severity https://shen-lab.org/publication/common-and-rare-variant-analyses-combined-with-single-cell-multiomics-reveal-cell-type-specific-molecular-mechanisms-of-covid-19-severity/ Mon, 21 Jun 2021 00:00:00 +0000 https://shen-lab.org/publication/common-and-rare-variant-analyses-combined-with-single-cell-multiomics-reveal-cell-type-specific-molecular-mechanisms-of-covid-19-severity/