Xiaotao SHEN

Xiaotao SHEN

Nanyang Assistant Professor

Nanyang Technological University Singapore

Principal Investigator πŸ‘¨β€πŸ«

My overarching research interests are bioinformatics algorithms development for multi-omics data, and their application to precision medicine. Specifically, I am interested in bioinformatics algorithm development, including 1) Comprehensive analysis workflow and deep learning for LC-MS data, 2) Metabolic network analysis, 3) Wearable and multi-omics data integration, and 4) microbiome and metabolome data integration. I also employed the developed bioinformatics algorithms as a unique systems biology approach to study the potential biomarkers and mechanisms of 1) pregnancy and related diseases, 2) aging and related diseases, and 3) cancer.

🐢 🏫 🈸 πŸ˜„ πŸ‘Š ✊ πŸ‘¨β€πŸ‘©β€πŸ‘¦ 🐼 🌏 πŸŽ‰ πŸ‡¨πŸ‡³

Interests
  • πŸ–₯️ Bioinformatics
  • πŸ“± Wearable
  • πŸ’° Multi-omics
  • πŸ‘΄ Aging and Aging related diseases
  • 🀰 Pregnancy and Pregnancy related diseases
Education
  • Postdoctoral Research Fellow, 2019/4-2024/4

    Stanford University School of Medicine

  • Ph.D., 2013/9-2018/12

    University of Chinese Academy of Sciences

  • BSc, 2009/9-2013/7

    Inner Mongolia University

πŸ‘₯ Other Members

Avatar

Jingxiang ZHANG

Nanyang Technological University

Research Fellow (2024-)

Research interests
  • πŸ“± Microbiome
  • πŸ–₯️ Bioinformatics
  • πŸ’° Multi-omics
View profile
Avatar

Yifei GE

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • πŸ–₯ Biostatistics
  • πŸ’° Mathematics
  • πŸ’» Microbiome
View profile
Avatar

Chi Fang HSU

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • πŸ–₯ Gut Microbiome
  • πŸ–₯ Toxicology
  • πŸ’» Multi-Omics
View profile
Avatar

Jiramet KINCHAGAWAT

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • πŸ’° Multi-omics
  • πŸ–₯ Bioinformatics
  • πŸ’» Artificial Intelligence
View profile
Avatar

Yijiang LIU

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • πŸ–₯ Bioinformatics
  • πŸ’° Biostatistics
  • πŸ’» Population Health
View profile
Avatar

Yuting WANG

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • πŸ–₯️ Bioinformatics
  • πŸ’° Multi-omics
  • πŸ‘΄ Aging and Aging related diseases
View profile
Avatar

Feifan ZHANG

Nanyang Technological University

PhD Candidate (2025-)

Research interests
  • πŸ–₯ Bioinformatics
  • πŸ’» Artificial Intelligence
View profile
Avatar

Kajal AGRAWAL

Nanyang Technological University

PhD Candidate (Co-supervised with Prof. Sunny Wong)

Research interests
  • 🧫 Oral and Gut Microbiome
  • 🦷 Periodontal Disease, Oral systemic disease
  • 🌱 Population Health
  • πŸ”¬ Translational Research
View profile
Avatar

Xiaoyu XU

Nanyang Technological University

PhD Candidate (Co-supervised with Prof. Kun Qian)

Research interests
  • πŸ–₯ renal cell carcinoma
  • πŸ’° Biostatistics
  • πŸ’» Multi-Omics
View profile
Avatar

Ruwen ZHOU

Nanyang Technological University

PhD Candidate (Co-supervised with Prof. Sunny Wong)

Research interests
  • πŸ–₯ Biostatistics
  • πŸ’° Mathematics
  • πŸ’» Microbiome
View profile
Avatar

Shuli ZHANG

Northeastern University

Visiting PhD Student (2026-2027)

Research interests
  • πŸ’° Multi-omics
  • πŸ«€ Cardiovascular diseases
  • πŸ”¬ Molecular genetics
View profile
Avatar

Diyan LI

Chengdu University

Visiting Scholar (2025-)

Research interests
  • πŸ’° Metagenomics
  • 🌐 Infertility
View profile
Avatar

Yuanming YANG

The First Affiliated Hospital of Guangzhou University of Chinese Medicine

Visiting Scholar (2025-)

Research interests
  • πŸ’° scRNA-seq
  • 🌐 multi-omics
View profile
Avatar

Hua ZHAO

Reproductive Medical Center, People's Hospital of Zhengzhou University and Henan Provincial People's Hospital

Visiting Scholar (2025-)

Research interests
  • πŸ’° Proteomics
  • 🌐 Metabolomics
View profile

Collaboration Network in The Lab

A live map of shared papers and mentoring connections across Shen Lab.

PI Researchers Students Co-supervised Students Intern
Member profiles and shared publications are connected in this map.

Alumni Summary